Running with gitlab-runner 18.2.0~pre.84.g53e970be (53e970be)  on blue-1.saas-linux-medium.runners-manager.gitlab.com/default 2QMMJaNn, system ID: s_406404729ae4 Resolving secrets section_start:1752553115:prepare_executor Preparing the "docker+machine" executor Using Docker executor with image registry.gitlab.com/rdatatable/dockerfiles/r-3.4.0 ... Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-3.4.0 Authenticating with credentials from job payload (GitLab Registry) Pulling docker image registry.gitlab.com/rdatatable/dockerfiles/r-3.4.0 ... Using docker image sha256:b20b23a3e03248250325d6a493b3b97c8d26a78ab4e59dff1ba538eb6b80bf89 for registry.gitlab.com/rdatatable/dockerfiles/r-3.4.0 with digest registry.gitlab.com/rdatatable/dockerfiles/r-3.4.0@sha256:0e6c9b21f6808c5dd6f8e466c1f55beb859121c5733bb17e15d1386608508b64 ... section_end:1752553147:prepare_executor section_start:1752553147:prepare_script Preparing environment Using effective pull policy of [always] for container sha256:0146258844ddeb0c7a7a2cd37dcd5f212ecd7bd597bc81f2aa99a8852be39e44 Running on runner-2qmmjann-project-3622566-concurrent-0 via runner-2qmmjann-s-l-m-amd64-1752553052-6084f495... section_end:1752553162:prepare_script section_start:1752553162:get_sources Getting source from Git repository Gitaly correlation ID: 4a86590f2db1c64464003f897b3eb140 Fetching changes... Initialized empty Git repository in /builds/Rdatatable/data.table/.git/ Created fresh repository. Checking out 67670e99 as detached HEAD (ref is master)... Skipping Git submodules setup $ git remote set-url origin "${CI_REPOSITORY_URL}" || echo 'Not a git repository; skipping' section_end:1752553168:get_sources section_start:1752553168:download_artifacts Downloading artifacts Downloading artifacts for build (10682361431)... Downloading artifacts from coordinator... ok  correlation_id= host=storage.googleapis.com id=10682361431 responseStatus=200 OK token=68_9i4z9e Downloading artifacts for mirror-packages (10682361376)... Downloading artifacts from coordinator... ok  correlation_id= host=storage.googleapis.com id=10682361376 responseStatus=200 OK token=68_9i4z9e section_end:1752553171:download_artifacts section_start:1752553171:step_script Executing "step_script" stage of the job script Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-3.4.0 Using docker image sha256:b20b23a3e03248250325d6a493b3b97c8d26a78ab4e59dff1ba538eb6b80bf89 for registry.gitlab.com/rdatatable/dockerfiles/r-3.4.0 with digest registry.gitlab.com/rdatatable/dockerfiles/r-3.4.0@sha256:0e6c9b21f6808c5dd6f8e466c1f55beb859121c5733bb17e15d1386608508b64 ... $ cp $(ls -1t bus/build/data.table_*.tar.gz | head -n 1) . $ mkdir -p ~/.R $ Rscript -e 'source(".ci/ci.R"); install.packages(dcf.dependencies("DESCRIPTION", which="all"), repos=file.path("file:", normalizePath("bus/mirror-packages/cran", mustWork=FALSE)), quiet=TRUE)' also installing the dependencies ‘commonmark’, ‘R.oo’, ‘R.methodsS3’, ‘xfun’, ‘litedown’ Updating HTML index of packages in '.Library' Making 'packages.html' ... done Warning message: packages ‘xts’, ‘knitr’ are not available (for R version 3.4.0) $ R CMD check --no-manual --no-build-vignettes --ignore-vignettes $(ls -1t data.table_*.tar.gz | head -n 1) * using log directory ‘/builds/Rdatatable/data.table/data.table.Rcheck’ * using R version 3.4.0 (2017-04-21) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * using options ‘--no-manual --ignore-vignettes’ * checking for file ‘data.table/DESCRIPTION’ ... OK * this is package ‘data.table’ version ‘1.17.99’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... NOTE Packages suggested but not available for checking: ‘xts’ ‘knitr’ * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘data.table’ can be installed ... OK * checking installed package size ... NOTE installed size is 7.9Mb sub-directories of 1Mb or more: libs 2.1Mb po 1.6Mb tests 2.0Mb * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking compiled code ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... SKIPPED * checking examples ... OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘autoprint.R’ Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ...17,20d16 < a < < 1: 1 < 2: 3 27,30d22 < a < < 1: 1 < 2: 3 32,36d23 < Index: < a < < 1: 1 < 2: 3 38,42d24 < Index: < a < < 1: 1 < 2: 3 60,63d41 < a < < 1: 1 < 2: 5 65,68d42 < a < < 1: 1 < 2: 6 72,75d45 < a < < 1: 1 < 2: 5 142,144d111 < a < < 1: 9 150,153d116 < a < < 1: 10 < 2: 10 155,158d117 < a < < 1: 10 < 2: 10 160,163d118 < a < < 1: 10 < 2: 10 209,211d163 < x y < < 1: 1 1 Running ‘froll.R’ Running ‘knitr.R’ Comparing ‘knitr.Rout’ to ‘knitr.Rout.save’ ... OK Running ‘main.R’ Running ‘mergelist.R’ Running ‘nafill.R’ Running ‘other.R’ Running ‘programming.R’ Running ‘S4.R’ Running ‘types.R’ OK * DONE Status: 2 NOTEs See ‘/builds/Rdatatable/data.table/data.table.Rcheck/00check.log’ for details. section_end:1752553300:step_script section_start:1752553300:after_script Running after_script Running after script... $ mkdir -p bus/$CI_JOB_NAME $ echo $CI_JOB_ID > bus/$CI_JOB_NAME/id $ echo $CI_JOB_STATUS > bus/$CI_JOB_NAME/status $ echo $CI_JOB_IMAGE > bus/$CI_JOB_NAME/image $ [ -d data.table.Rcheck ] && mv data.table.Rcheck bus/$CI_JOB_NAME/ section_end:1752553301:after_script section_start:1752553301:upload_artifacts_on_success Uploading artifacts for successful job Uploading artifacts... bus/test-lin-ancient-cran: found 649 matching artifact files and directories Uploading artifacts as "archive" to coordinator... 201 Created correlation_id=1d793f8625c2603dfd32991544e2660f id=10682361620 responseStatus=201 Created token=68_9i4z9e section_end:1752553305:upload_artifacts_on_success section_start:1752553305:cleanup_file_variables Cleaning up project directory and file based variables section_end:1752553306:cleanup_file_variables Job succeeded